"Source Name" "Material Type" "Characteristics [Age]" "Characteristics [ClinicalHistory]" "Characteristics [DiseaseStaging]" "Characteristics [DiseaseState]" "Characteristics [Individual]" "Characteristics [OrganismPart]" "Characteristics [Organism]" "Characteristics [Sex]" "Characteristics [TimeUnit]" "Characteristics [TumourGrading]" "Protocol REF" "Protocol REF" "Sample Name" "Material Type" "Protocol REF" "Parameter Value [amount_of_starting_material]" "Parameter Value [amplification_method]" "Parameter Value [processing_centre]" "Extract Name" "Material Type" "Protocol REF" "Labeled Extract Name" "Material Type" Label "Protocol REF" "Hybridization Name" "Array Design REF" "Protocol REF" "Scan Name" "Array Data File" "Normalization Name" "Derived Array Data File" Comment[CDF] "Factor Value [DISEASESTAGING]" "Factor Value [DISEASESTATE]" "Factor Value [INDIVIDUAL]" "Factor Value [LINEAR_AMPLIFICATION]" nJ82_P cell_line "tumour cell line" "patient J82" "Homo sapiens" nJ82_P organism_part P-EXML-4 "250ng DNA" none PICR nJ82_P total_RNA P-EXML-6 "nJ82_P biotin" synthetic_DNA biotin P-EXML-8 nJ82_P A-AFFY-64 P-EXML-10 nJ82_P nJ82_P.CEL nJ82_P nJ82_P.CHP Mapping10K_Xba131.CDF "not applicable" "tumour cell line" "patient J82" none nJ82ebv_P cell_line "immortalised cell line" "patient J82" "Homo sapiens" nJ82ebv_P organism_part P-EXML-4 "250ng DNA" none PICR nJ82ebv_P total_RNA P-EXML-6 "nJ82ebv_P biotin" synthetic_DNA biotin P-EXML-8 nJ82ebv_P A-AFFY-64 P-EXML-10 nJ82ebv_P nJ82ebv_P.CEL nJ82ebv_P nJ82ebv_P.CHP Mapping10K_Xba131.CDF "not applicable" "immortalised cell line" "patient J82" none aJ82_1_W cell_line "tumour cell line" "patient J82" "Homo sapiens" aJ82_1_W organism_part P-EXML-4 "1ng DNA" WGA Warwick aJ82_1_W total_RNA P-EXML-6 "aJ82_1_W biotin" synthetic_DNA biotin P-EXML-8 aJ82_1_W A-AFFY-64 P-EXML-10 aJ82_1_W aJ82_1_W.CEL aJ82_1_W aJ82_1_W.CHP Mapping10K_Xba131.CDF "not applicable" "tumour cell line" "patient J82" WGA aJ82ebv_1_W cell_line "immortalised cell line" "patient J82" "Homo sapiens" aJ82ebv_1_W organism_part P-EXML-4 "1ng DNA" WGA Warwick aJ82ebv_1_W total_RNA P-EXML-6 "aJ82ebv_1_W biotin" synthetic_DNA biotin P-EXML-8 aJ82ebv_1_W A-AFFY-64 P-EXML-10 aJ82ebv_1_W aJ82ebv_1_W.CEL aJ82ebv_1_W aJ82ebv_1_W.CHP Mapping10K_Xba131.CDF "not applicable" "immortalised cell line" "patient J82" WGA aJ82_3_W cell_line "tumour cell line" "patient J82" "Homo sapiens" aJ82_3_W organism_part P-EXML-4 "3ng DNA" WGA Warwick aJ82_3_W total_RNA P-EXML-6 "aJ82_3_W biotin" synthetic_DNA biotin P-EXML-8 aJ82_3_W A-AFFY-64 P-EXML-10 aJ82_3_W aJ82_3_W.CEL aJ82_3_W aJ82_3_W.CHP Mapping10K_Xba131.CDF "not applicable" "tumour cell line" "patient J82" WGA nJ82_W cell_line "tumour cell line" "patient J82" "Homo sapiens" nJ82_W organism_part P-EXML-4 "250ng DNA" none Warwick nJ82_W total_RNA P-EXML-6 "nJ82_W biotin" synthetic_DNA biotin P-EXML-8 nJ82_W A-AFFY-64 P-EXML-10 nJ82_W nJ82_W.CEL nJ82_W nJ82_W.CHP Mapping10K_Xba131.CDF "not applicable" "tumour cell line" "patient J82" none 0904_MK18_10K_90J82 cell_line "mixed source cell line" "patient J82" "Homo sapiens" 0904_MK18_10K_90J82 organism_part P-EXML-4 "250ng DNA" none PICR 0904_MK18_10K_90J82 total_RNA P-EXML-6 "0904_MK18_10K_90J82 biotin" synthetic_DNA biotin P-EXML-8 0904_MK18_10K_90J82 A-AFFY-64 P-EXML-10 0904_MK18_10K_90J82 0904_MK18_10K_90J82.CEL 0904_MK18_10K_90J82 0904_MK18_10K_90J82.CHP Mapping10K_Xba131.CDF "not applicable" "mixed source cell line" "patient J82" none 0904_MK19_10K_80J82 cell_line "mixed source cell line" "patient J82" "Homo sapiens" 0904_MK19_10K_80J82 organism_part P-EXML-4 "250ng DNA" none PICR 0904_MK19_10K_80J82 total_RNA P-EXML-6 "0904_MK19_10K_80J82 biotin" synthetic_DNA biotin P-EXML-8 0904_MK19_10K_80J82 A-AFFY-64 P-EXML-10 0904_MK19_10K_80J82 0904_MK19_10K_80J82.CEL 0904_MK19_10K_80J82 0904_MK19_10K_80J82.CHP Mapping10K_Xba131.CDF "not applicable" "mixed source cell line" "patient J82" none 0904_MK20_10K_70J82 cell_line "mixed source cell line" "patient J82" "Homo sapiens" 0904_MK20_10K_70J82 organism_part P-EXML-4 "250ng DNA" none PICR 0904_MK20_10K_70J82 total_RNA P-EXML-6 "0904_MK20_10K_70J82 biotin" synthetic_DNA biotin P-EXML-8 0904_MK20_10K_70J82 A-AFFY-64 P-EXML-10 0904_MK20_10K_70J82 0904_MK20_10K_70J82.CEL 0904_MK20_10K_70J82 0904_MK20_10K_70J82.CHP Mapping10K_Xba131.CDF "not applicable" "mixed source cell line" "patient J82" none Case1_aLN organism_part 65 "smoking history: 50 pack years" aLN "squamous cell carcinoma" "case 1" "lymph node" "Homo sapiens" male years "T2, N0, stage 1b" P-EXML-2 P-EXML-3 Case1_aLN organism_part P-EXML-4 "1035 cells" WGA Warwick Case1_aLN total_RNA P-EXML-6 "Case1_aLN biotin" synthetic_DNA biotin P-EXML-8 Case1_aLN A-AFFY-64 P-EXML-10 Case1_aLN Case1_aLN.CEL Case1_aLN Case1_aLN.CHP Mapping10K_Xba131.CDF aLN "squamous cell carcinoma" "case 1" WGA Case1_aHYP organism_part 65 "smoking history: 50 pack years" aHYP "squamous cell carcinoma" "case 1" lung "Homo sapiens" male years "T2, N0, stage 1b" P-EXML-2 P-EXML-3 Case1_aHYP organism_part P-EXML-4 "816 cells" WGA Warwick Case1_aHYP total_RNA P-EXML-6 "Case1_aHYP biotin" synthetic_DNA biotin P-EXML-8 Case1_aHYP A-AFFY-64 P-EXML-10 Case1_aHYP Case1_aHYP.CEL Case1_aHYP Case1_aHYP.CHP Mapping10K_Xba131.CDF aHYP "squamous cell carcinoma" "case 1" WGA Case1_aTUM organism_part 65 "smoking history: 50 pack years" aTUM "squamous cell carcinoma" "case 1" lung "Homo sapiens" male years "T2, N0, stage 1b" P-EXML-2 P-EXML-3 Case1_aTUM organism_part P-EXML-4 "1136 cells" WGA Warwick Case1_aTUM total_RNA P-EXML-6 "Case1_aTUM biotin" synthetic_DNA biotin P-EXML-8 Case1_aTUM A-AFFY-64 P-EXML-10 Case1_aTUM Case1_aTUM.CEL Case1_aTUM Case1_aTUM.CHP Mapping10K_Xba131.CDF aTUM "squamous cell carcinoma" "case 1" WGA Case2_aAVM organism_part 70 "smoking history: 30 pack years" aAVM "large cell neuroendocrine carcinoma" "case 2" macrophage "Homo sapiens" female years "T2, N0, M0, stage 1b" P-EXML-2 P-EXML-3 Case2_aAVM organism_part P-EXML-4 "558 cells" WGA Warwick Case2_aAVM total_RNA P-EXML-6 "Case2_aAVM biotin" synthetic_DNA biotin P-EXML-8 Case2_aAVM A-AFFY-64 P-EXML-10 Case2_aAVM Case2_aAVM.CEL Case2_aAVM Case2_aAVM.CHP Mapping10K_Xba131.CDF aAVM "large cell neuroendocrine carcinoma" "case 2" WGA Case2_aBE organism_part 70 "smoking history: 30 pack years" aBE "large cell neuroendocrine carcinoma" "case 2" lung "Homo sapiens" female years "T2, N0, M0, stage 1b" P-EXML-2 P-EXML-3 Case2_aBE organism_part P-EXML-4 nk WGA Warwick Case2_aBE total_RNA P-EXML-6 "Case2_aBE biotin" synthetic_DNA biotin P-EXML-8 Case2_aBE A-AFFY-64 P-EXML-10 Case2_aBE Case2_aBE.CEL Case2_aBE Case2_aBE.CHP Mapping10K_Xba131.CDF aBE "large cell neuroendocrine carcinoma" "case 2" WGA Case2_aOE organism_part 70 "smoking history: 30 pack years" aOE "large cell neuroendocrine carcinoma" "case 2" lung "Homo sapiens" female years "T2, N0, M0, stage 1b" P-EXML-2 P-EXML-3 Case2_aOE organism_part P-EXML-4 "419 cells" WGA Warwick Case2_aOE total_RNA P-EXML-6 "Case2_aOE biotin" synthetic_DNA biotin P-EXML-8 Case2_aOE A-AFFY-64 P-EXML-10 Case2_aOE Case2_aOE.CEL Case2_aOE Case2_aOE.CHP Mapping10K_Xba131.CDF aOE "large cell neuroendocrine carcinoma" "case 2" WGA Case2_aTUM1 organism_part 70 "smoking history: 30 pack years" aTUM1 "large cell neuroendocrine carcinoma" "case 2" lung "Homo sapiens" female years "T2, N0, M0, stage 1b" P-EXML-2 P-EXML-3 Case2_aTUM1 organism_part P-EXML-4 "446 cells" WGA Warwick Case2_aTUM1 total_RNA P-EXML-6 "Case2_aTUM1 biotin" synthetic_DNA biotin P-EXML-8 Case2_aTUM1 A-AFFY-64 P-EXML-10 Case2_aTUM1 Case2_aTUM1.CEL Case2_aTUM1 Case2_aTUM1.CHP Mapping10K_Xba131.CDF aTUM1 "large cell neuroendocrine carcinoma" "case 2" WGA Case2_aTUM2 organism_part 70 "smoking history: 30 pack years" aTUM2 "large cell neuroendocrine carcinoma" "case 2" lung "Homo sapiens" female years "T2, N0, M0, stage 1b" P-EXML-2 P-EXML-3 Case2_aTUM2 organism_part P-EXML-4 "498 cells" WGA Warwick Case2_aTUM2 total_RNA P-EXML-6 "Case2_aTUM2 biotin" synthetic_DNA biotin P-EXML-9 Case2_aTUM2 A-AFFY-65 P-EXML-10 Case2_aTUM2 Case2_aTUM2.CEL Case2_aTUM2 Case2_aTUM2.CHP Mapping10K_Xba142.CDF aTUM2 "large cell neuroendocrine carcinoma" "case 2" WGA Case3_nLN organism_part 47 "smoking history: 30 pack years" nLN "small cell lung cancer" "case 3" "lymph node" "Homo sapiens" female years "T1, N2, M0, stage 3" P-EXML-2 Case3_nLN organism_part P-EXML-4 "250ng DNA" none Warwick Case3_nLN total_RNA P-EXML-6 "Case3_nLN biotin" synthetic_DNA biotin P-EXML-8 Case3_nLN A-AFFY-64 P-EXML-10 Case3_nLN Case3_nLN.CEL Case3_nLN Case3_nLN.CHP Mapping10K_Xba131.CDF nLN "small cell lung cancer" "case 3" none Case3_aLN organism_part 47 "smoking history: 30 pack years" aLN "small cell lung cancer" "case 3" "lymph node" "Homo sapiens" female years "T1, N2, M0, stage 3" P-EXML-2 P-EXML-3 Case3_aLN organism_part P-EXML-4 "545 cells" WGA Warwick Case3_aLN total_RNA P-EXML-6 "Case3_aLN biotin" synthetic_DNA biotin P-EXML-8 Case3_aLN A-AFFY-64 P-EXML-10 Case3_aLN Case3_aLN.CEL Case3_aLN Case3_aLN.CHP Mapping10K_Xba131.CDF aLN "small cell lung cancer" "case 3" WGA Case3_aBE organism_part 47 "smoking history: 30 pack years" aBE "small cell lung cancer" "case 3" lung "Homo sapiens" female years "T1, N2, M0, stage 3" P-EXML-2 P-EXML-3 Case3_aBE organism_part P-EXML-4 "843 cells" WGA Warwick Case3_aBE total_RNA P-EXML-6 "Case3_aBE biotin" synthetic_DNA biotin P-EXML-8 Case3_aBE A-AFFY-64 P-EXML-10 Case3_aBE Case3_aBE.CEL Case3_aBE Case3_aBE.CHP Mapping10K_Xba131.CDF aBE "small cell lung cancer" "case 3" WGA Case3_aOE organism_part 47 "smoking history: 30 pack years" aOE "small cell lung cancer" "case 3" lung "Homo sapiens" female years "T1, N2, M0, stage 3" P-EXML-2 P-EXML-3 Case3_aOE organism_part P-EXML-4 "200 cells" WGA Warwick Case3_aOE total_RNA P-EXML-6 "Case3_aOE biotin" synthetic_DNA biotin P-EXML-9 Case3_aOE A-AFFY-65 P-EXML-10 Case3_aOE Case3_aOE.CEL Case3_aOE Case3_aOE.CHP Mapping10K_Xba142.CDF aOE "small cell lung cancer" "case 3" WGA Case3_nTB organism_part 47 "smoking history: 30 pack years" nTB "small cell lung cancer" "case 3" lung "Homo sapiens" female years "T1, N2, M0, stage 3" P-EXML-2 Case3_nTB organism_part P-EXML-4 "250ng DNA" none Warwick Case3_nTB total_RNA P-EXML-6 "Case3_nTB biotin" synthetic_DNA biotin P-EXML-8 Case3_nTB A-AFFY-64 P-EXML-10 Case3_nTB Case3_nTB.CEL Case3_nTB Case3_nTB.CHP Mapping10K_Xba131.CDF nTB "small cell lung cancer" "case 3" none Case3_aTUM1 organism_part 47 "smoking history: 30 pack years" aTUM1 "small cell lung cancer" "case 3" lung "Homo sapiens" female years "T1, N2, M0, stage 3" P-EXML-2 P-EXML-3 Case3_aTUM1 organism_part P-EXML-4 "1300 cells" WGA Warwick Case3_aTUM1 total_RNA P-EXML-6 "Case3_aTUM1 biotin" synthetic_DNA biotin P-EXML-8 Case3_aTUM1 A-AFFY-64 P-EXML-10 Case3_aTUM1 Case3_aTUM1.CEL Case3_aTUM1 Case3_aTUM1.CHP Mapping10K_Xba131.CDF aTUM1 "small cell lung cancer" "case 3" WGA Case3_aTUM2 organism_part 47 "smoking history: 30 pack years" aTUM2 "small cell lung cancer" "case 3" lung "Homo sapiens" female years "T1, N2, M0, stage 3" P-EXML-2 P-EXML-3 Case3_aTUM2 organism_part P-EXML-4 "997 cells" WGA Warwick Case3_aTUM2 total_RNA P-EXML-6 "Case3_aTUM2 biotin" synthetic_DNA biotin P-EXML-8 Case3_aTUM2 A-AFFY-64 P-EXML-10 Case3_aTUM2 Case3_aTUM2.CEL Case3_aTUM2 Case3_aTUM2.CHP Mapping10K_Xba131.CDF aTUM2 "small cell lung cancer" "case 3" WGA Case3_aTUM3 organism_part 47 "smoking history: 30 pack years" aTUM3 "small cell lung cancer" "case 3" lung "Homo sapiens" female years "T1, N2, M0, stage 3" P-EXML-2 P-EXML-3 Case3_aTUM3 organism_part P-EXML-4 "350 cells" WGA Warwick Case3_aTUM3 total_RNA P-EXML-6 "Case3_aTUM3 biotin" synthetic_DNA biotin P-EXML-8 Case3_aTUM3 A-AFFY-64 P-EXML-10 Case3_aTUM3 Case3_aTUM3.CEL Case3_aTUM3 Case3_aTUM3.CHP Mapping10K_Xba131.CDF aTUM3 "small cell lung cancer" "case 3" WGA