"Source Name" "Material Type" "Characteristics [CellLine]" "Characteristics [Organism]" "Characteristics [Ploidy]" "Characteristics [Provider]" "Characteristics [Treatment]" "Protocol REF" "Sample Name" "Material Type" "Protocol REF" "Protocol REF" "Extract Name" "Material Type" "Protocol REF" "Labeled Extract Name" "Material Type" Label "Protocol REF" "Hybridization Name" "Array Design REF" "Protocol REF" "Scan Name" "Array Data File" "Protocol REF" "Normalization Name" "Comment[Normalization Type]" "Derived Array Data Matrix File" "Factor Value [CELLLINE]" "Factor Value [PLOIDY]" DW "cell line" "colon RKO" "Homo sapiens" diploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "clone selection as diploid" P_IGR_SAMPLE_04_TETRA_1 "DW sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "DW extract" total_RNA P_IGR_LABEL_CY5_04 "DW Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "DW Cy5_Pool1 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119523_S01_A01 US14702370_251239119523_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" diploid Pool1 "cell line" "colon RKO" "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_1 "Pool1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "Pool1 extract" total_RNA P_IGR_LABEL_CY3_04 "Pool1 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "DW Cy5_Pool1 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119523_S01_A01 US14702370_251239119523_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" DW "cell line" "colon RKO" "Homo sapiens" diploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "clone selection as diploid" P_IGR_SAMPLE_04_TETRA_1 "DW sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "DW extract" total_RNA P_IGR_LABEL_CY3_04 "DW Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "DW Cy3_Pool1 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119541_S01_A01 US14702370_251239119541_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" diploid Pool1 "cell line" "colon RKO" "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_1 "Pool1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "Pool1 extract" total_RNA P_IGR_LABEL_CY5_04 "Pool1 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "DW Cy3_Pool1 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119541_S01_A01 US14702370_251239119541_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" DX "cell line" "colon RKO" "Homo sapiens" diploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "clone selection as diploid" P_IGR_SAMPLE_04_TETRA_1 "DX sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "DX extract" total_RNA P_IGR_LABEL_CY5_04 "DX Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "DX Cy5_Pool1 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119609_S01_A01 US14702370_251239119609_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" diploid Pool1 "cell line" "colon RKO" "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_1 "Pool1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "Pool1 extract" total_RNA P_IGR_LABEL_CY3_04 "Pool1 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "DX Cy5_Pool1 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119609_S01_A01 US14702370_251239119609_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" DX "cell line" "colon RKO" "Homo sapiens" diploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "clone selection as diploid" P_IGR_SAMPLE_04_TETRA_1 "DX sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "DX extract" total_RNA P_IGR_LABEL_CY3_04 "DX Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "DX Cy3_Pool1 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119524_S01_A01 US14702370_251239119524_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" diploid Pool1 "cell line" "colon RKO" "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_1 "Pool1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "Pool1 extract" total_RNA P_IGR_LABEL_CY5_04 "Pool1 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "DX Cy3_Pool1 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119524_S01_A01 US14702370_251239119524_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" DY "cell line" "colon RKO" "Homo sapiens" diploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "clone selection as diploid" P_IGR_SAMPLE_04_TETRA_1 "DY sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "DY extract" total_RNA P_IGR_LABEL_CY5_04 "DY Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "DY Cy5_Pool1 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119530_S01_A01 US14702370_251239119530_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" diploid Pool1 "cell line" "colon RKO" "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_1 "Pool1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "Pool1 extract" total_RNA P_IGR_LABEL_CY3_04 "Pool1 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "DY Cy5_Pool1 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119530_S01_A01 US14702370_251239119530_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" DY "cell line" "colon RKO" "Homo sapiens" diploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "clone selection as diploid" P_IGR_SAMPLE_04_TETRA_1 "DY sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "DY extract" total_RNA P_IGR_LABEL_CY3_04 "DY Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "DY Cy3_Pool1 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119525_S01_A01 US14702370_251239119525_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" diploid Pool1 "cell line" "colon RKO" "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_1 "Pool1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "Pool1 extract" total_RNA P_IGR_LABEL_CY5_04 "Pool1 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "DY Cy3_Pool1 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119525_S01_A01 US14702370_251239119525_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" DZ "cell line" "colon RKO" "Homo sapiens" diploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "clone selection as diploid" P_IGR_SAMPLE_04_TETRA_1 "DZ sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "DZ extract" total_RNA P_IGR_LABEL_CY5_04 "DZ Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "DZ Cy5_Pool1 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119531_S01_A01 US14702370_251239119531_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" diploid Pool1 "cell line" "colon RKO" "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_1 "Pool1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "Pool1 extract" total_RNA P_IGR_LABEL_CY3_04 "Pool1 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "DZ Cy5_Pool1 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119531_S01_A01 US14702370_251239119531_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" DZ "cell line" "colon RKO" "Homo sapiens" diploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "clone selection as diploid" P_IGR_SAMPLE_04_TETRA_1 "DZ sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "DZ extract" total_RNA P_IGR_LABEL_CY3_04 "DZ Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "DZ Cy3_Pool1 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119614_S01_A01 US14702370_251239119614_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" diploid Pool1 "cell line" "colon RKO" "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_1 "Pool1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "Pool1 extract" total_RNA P_IGR_LABEL_CY5_04 "Pool1 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "DZ Cy3_Pool1 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119614_S01_A01 US14702370_251239119614_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" TA "cell line" "colon RKO" "Homo sapiens" tetraploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "clone selection as tetraploid" P_IGR_SAMPLE_04_TETRA_1 "TA sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "TA extract" total_RNA P_IGR_LABEL_CY5_04 "TA Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "TA Cy5_Pool1 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119519_S01_A01 US14702370_251239119519_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" tetraploid Pool1 "cell line" "colon RKO" "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_1 "Pool1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "Pool1 extract" total_RNA P_IGR_LABEL_CY3_04 "Pool1 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "TA Cy5_Pool1 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119519_S01_A01 US14702370_251239119519_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" TA "cell line" "colon RKO" "Homo sapiens" tetraploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "clone selection as tetraploid" P_IGR_SAMPLE_04_TETRA_1 "TA sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "TA extract" total_RNA P_IGR_LABEL_CY3_04 "TA Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "TA Cy3_Pool1 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119487_S01_A01 US14702370_251239119487_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" tetraploid Pool1 "cell line" "colon RKO" "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_1 "Pool1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "Pool1 extract" total_RNA P_IGR_LABEL_CY5_04 "Pool1 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "TA Cy3_Pool1 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119487_S01_A01 US14702370_251239119487_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" TB "cell line" "colon RKO" "Homo sapiens" tetraploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "clone selection as tetraploid" P_IGR_SAMPLE_04_TETRA_1 "TB sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "TB extract" total_RNA P_IGR_LABEL_CY5_04 "TB Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "TB Cy5_Pool1 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119520_S01_A01 US14702370_251239119520_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" tetraploid Pool1 "cell line" "colon RKO" "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_1 "Pool1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "Pool1 extract" total_RNA P_IGR_LABEL_CY3_04 "Pool1 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "TB Cy5_Pool1 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119520_S01_A01 US14702370_251239119520_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" TB "cell line" "colon RKO" "Homo sapiens" tetraploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "clone selection as tetraploid" P_IGR_SAMPLE_04_TETRA_1 "TB sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "TB extract" total_RNA P_IGR_LABEL_CY3_04 "TB Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "TB Cy3_Pool1 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119489_S01_A01 US14702370_251239119489_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" tetraploid Pool1 "cell line" "colon RKO" "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_1 "Pool1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "Pool1 extract" total_RNA P_IGR_LABEL_CY5_04 "Pool1 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "TB Cy3_Pool1 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119489_S01_A01 US14702370_251239119489_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" TC "cell line" "colon RKO" "Homo sapiens" tetraploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "clone selection as tetraploid" P_IGR_SAMPLE_04_TETRA_1 "TC sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "TC extract" total_RNA P_IGR_LABEL_CY5_04 "TC Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "TC Cy5_Pool1 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119608_S01_A01 US14702370_251239119608_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" tetraploid Pool1 "cell line" "colon RKO" "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_1 "Pool1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "Pool1 extract" total_RNA P_IGR_LABEL_CY3_04 "Pool1 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "TC Cy5_Pool1 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119608_S01_A01 US14702370_251239119608_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" TC "cell line" "colon RKO" "Homo sapiens" tetraploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "clone selection as tetraploid" P_IGR_SAMPLE_04_TETRA_1 "TC sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "TC extract" total_RNA P_IGR_LABEL_CY3_04 "TC Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "TC Cy3_Pool1 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119538_S01_A01 US14702370_251239119538_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" tetraploid Pool1 "cell line" "colon RKO" "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_1 "Pool1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "Pool1 extract" total_RNA P_IGR_LABEL_CY5_04 "Pool1 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "TC Cy3_Pool1 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119538_S01_A01 US14702370_251239119538_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" TD "cell line" "colon RKO" "Homo sapiens" tetraploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "clone selection as tetraploid" P_IGR_SAMPLE_04_TETRA_1 "TD sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "TD extract" total_RNA P_IGR_LABEL_CY5_04 "TD Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "TD Cy5_Pool1 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119522_S01_A01 US14702370_251239119522_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" tetraploid Pool1 "cell line" "colon RKO" "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_1 "Pool1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "Pool1 extract" total_RNA P_IGR_LABEL_CY3_04 "Pool1 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "TD Cy5_Pool1 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119522_S01_A01 US14702370_251239119522_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" TD "cell line" "colon RKO" "Homo sapiens" tetraploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "clone selection as tetraploid" P_IGR_SAMPLE_04_TETRA_1 "TD sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "TD extract" total_RNA P_IGR_LABEL_CY3_04 "TD Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "TD Cy3_Pool1 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119540_S01_A01 US14702370_251239119540_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" tetraploid Pool1 "cell line" "colon RKO" "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_1 "Pool1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04A "Pool1 extract" total_RNA P_IGR_LABEL_CY5_04 "Pool1 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "TD Cy3_Pool1 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239119540_S01_A01 US14702370_251239119540_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt "colon RKO" Co3 "cell line" HCT116 "Homo sapiens" diploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Co3 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Co3 extract" total_RNA P_IGR_LABEL_CY5_04 "Co3 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "Co3 Cy5-Pool2 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124865_S01_A01 US14702370_251239124865_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 diploid Pool2 "cell line" HCT116 "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Pool2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Pool2 extract" total_RNA P_IGR_LABEL_CY5_04 "Pool2 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "Co3 Cy5-Pool2 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124865_S01_A01 US14702370_251239124865_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 Co3 "cell line" HCT116 "Homo sapiens" diploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Co3 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Co3 extract" total_RNA P_IGR_LABEL_CY3_04 "Co3 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "Co3 Cy3-Pool2 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124928_S01_A01 US14702370_251239124928_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 diploid Pool2 "cell line" HCT116 "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Pool2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Pool2 extract" total_RNA P_IGR_LABEL_CY3_04 "Pool2 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "Co3 Cy3-Pool2 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124928_S01_A01 US14702370_251239124928_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 Co4 "cell line" HCT116 "Homo sapiens" diploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Co4 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Co4 extract" total_RNA P_IGR_LABEL_CY5_04 "Co4 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "Co4 Cy5-Pool2 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124866_S01_A01 US14702370_251239124866_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 diploid Pool2 "cell line" HCT116 "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Pool2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Pool2 extract" total_RNA P_IGR_LABEL_CY5_04 "Pool2 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "Co4 Cy5-Pool2 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124866_S01_A01 US14702370_251239124866_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 Co4 "cell line" HCT116 "Homo sapiens" diploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Co4 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Co4 extract" total_RNA P_IGR_LABEL_CY3_04 "Co4 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "Co4 Cy3-Pool2 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124929_S01_A01 US14702370_251239124929_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 diploid Pool2 "cell line" HCT116 "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Pool2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Pool2 extract" total_RNA P_IGR_LABEL_CY3_04 "Pool2 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "Co4 Cy3-Pool2 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124929_S01_A01 US14702370_251239124929_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 Co1 "cell line" HCT116 "Homo sapiens" diploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Co1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Co1 extract" total_RNA P_IGR_LABEL_CY5_04 "Co1 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "Co1 Cy5-Pool2 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124869_S01_A01 US14702370_251239124869_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 diploid Pool2 "cell line" HCT116 "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Pool2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Pool2 extract" total_RNA P_IGR_LABEL_CY5_04 "Pool2 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "Co1 Cy5-Pool2 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124869_S01_A01 US14702370_251239124869_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 Co1 "cell line" HCT116 "Homo sapiens" diploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Co1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Co1 extract" total_RNA P_IGR_LABEL_CY3_04 "Co1 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "Co1 Cy3-Pool2 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124932_S01_A01 US14702370_251239124932_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 diploid Pool2 "cell line" HCT116 "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Pool2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Pool2 extract" total_RNA P_IGR_LABEL_CY3_04 "Pool2 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "Co1 Cy3-Pool2 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124932_S01_A01 US14702370_251239124932_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 Co2 "cell line" HCT116 "Homo sapiens" diploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Co2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Co2 extract" total_RNA P_IGR_LABEL_CY5_04 "Co2 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "Co2 Cy5-Pool2 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124925_S01_A01 US14702370_251239124925_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 diploid Pool2 "cell line" HCT116 "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Pool2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Pool2 extract" total_RNA P_IGR_LABEL_CY5_04 "Pool2 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "Co2 Cy5-Pool2 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124925_S01_A01 US14702370_251239124925_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 Co2 "cell line" HCT116 "Homo sapiens" diploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Co2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Co2 extract" total_RNA P_IGR_LABEL_CY3_04 "Co2 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "Co2 Cy3-Pool2 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124933_S01_A01 US14702370_251239124933_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 diploid Pool2 "cell line" HCT116 "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Pool2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Pool2 extract" total_RNA P_IGR_LABEL_CY3_04 "Pool2 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "Co2 Cy3-Pool2 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124933_S01_A01 US14702370_251239124933_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 C1 "cell line" HCT116 "Homo sapiens" tetraploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "cytochalasin D " P_IGR_SAMPLE_04_TETRA_2 "C1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "C1 extract" total_RNA P_IGR_LABEL_CY5_04 "C1 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "C1 Cy5-Pool2 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124926_S01_A01 US14702370_251239124926_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 tetraploid Pool2 "cell line" HCT116 "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Pool2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Pool2 extract" total_RNA P_IGR_LABEL_CY5_04 "Pool2 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "C1 Cy5-Pool2 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124926_S01_A01 US14702370_251239124926_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 C1 "cell line" HCT116 "Homo sapiens" tetraploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "cytochalasin D " P_IGR_SAMPLE_04_TETRA_2 "C1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "C1 extract" total_RNA P_IGR_LABEL_CY3_04 "C1 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "C1 Cy3-Pool2 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124934_S01_A01 US14702370_251239124934_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 tetraploid Pool2 "cell line" HCT116 "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Pool2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Pool2 extract" total_RNA P_IGR_LABEL_CY3_04 "Pool2 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "C1 Cy3-Pool2 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124934_S01_A01 US14702370_251239124934_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 C2 "cell line" HCT116 "Homo sapiens" tetraploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "cytochalasin D " P_IGR_SAMPLE_04_TETRA_2 "C2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "C2 extract" total_RNA P_IGR_LABEL_CY5_04 "C2 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "C2 Cy5-Pool2 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124927_S01_A01 US14702370_251239124927_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 tetraploid Pool2 "cell line" HCT116 "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Pool2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Pool2 extract" total_RNA P_IGR_LABEL_CY5_04 "Pool2 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "C2 Cy5-Pool2 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124927_S01_A01 US14702370_251239124927_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 C2 "cell line" HCT116 "Homo sapiens" tetraploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" "cytochalasin D " P_IGR_SAMPLE_04_TETRA_2 "C2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "C2 extract" total_RNA P_IGR_LABEL_CY3_04 "C2 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "C2 Cy3-Pool2 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124940_S01_A01 US14702370_251239124940_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 tetraploid Pool2 "cell line" HCT116 "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Pool2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Pool2 extract" total_RNA P_IGR_LABEL_CY3_04 "Pool2 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "C2 Cy3-Pool2 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124940_S01_A01 US14702370_251239124940_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 N1 "cell line" HCT116 "Homo sapiens" tetraploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" nocodazole P_IGR_SAMPLE_04_TETRA_2 "N1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "N1 extract" total_RNA P_IGR_LABEL_CY5_04 "N1 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "N1 Cy5-Pool2 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124867_S01_A01 US14702370_251239124867_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 tetraploid Pool2 "cell line" HCT116 "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Pool2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Pool2 extract" total_RNA P_IGR_LABEL_CY5_04 "Pool2 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "N1 Cy5-Pool2 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124867_S01_A01 US14702370_251239124867_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 N1 "cell line" HCT116 "Homo sapiens" tetraploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" nocodazole P_IGR_SAMPLE_04_TETRA_2 "N1 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "N1 extract" total_RNA P_IGR_LABEL_CY3_04 "N1 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "N1 Cy3-Pool2 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124930_S01_A01 US14702370_251239124930_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 tetraploid Pool2 "cell line" HCT116 "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Pool2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Pool2 extract" total_RNA P_IGR_LABEL_CY3_04 "Pool2 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "N1 Cy3-Pool2 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124930_S01_A01 US14702370_251239124930_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 N2 "cell line" HCT116 "Homo sapiens" tetraploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" nocodazole P_IGR_SAMPLE_04_TETRA_2 "N2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "N2 extract" total_RNA P_IGR_LABEL_CY5_04 "N2 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "N2 Cy5-Pool2 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124868_S01_A01 US14702370_251239124868_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 tetraploid Pool2 "cell line" HCT116 "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Pool2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Pool2 extract" total_RNA P_IGR_LABEL_CY5_04 "Pool2 Cy5 Cy5" synthetic_RNA Cy5 P_IGR_HYBRID_04 "N2 Cy5-Pool2 Cy5 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124868_S01_A01 US14702370_251239124868_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 N2 "cell line" HCT116 "Homo sapiens" tetraploid "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" nocodazole P_IGR_SAMPLE_04_TETRA_2 "N2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "N2 extract" total_RNA P_IGR_LABEL_CY3_04 "N2 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "N2 Cy3-Pool2 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124931_S01_A01 US14702370_251239124931_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116 tetraploid Pool2 "cell line" HCT116 "Homo sapiens" "CNRS-UMR8125, Institut Gustave Roussy, 94805 Villejuif, France" P_IGR_SAMPLE_04_TETRA_2 "Pool2 sample" organism_part P_IGR_EXTRACT_04 P_IGR_POOL_04B "Pool2 extract" total_RNA P_IGR_LABEL_CY3_04 "Pool2 Cy3 Cy3" synthetic_RNA Cy3 P_IGR_HYBRID_04 "N2 Cy3-Pool2 Cy3 hyb" A-MEXP-304 P_IGR_SCANNING_04 US14702370_251239124931_S01_A01 US14702370_251239124931_S01_A01.txt P_IGR_TRANSFORM_04 igr_ploidy_gk_all_seqs_all_exps_hp.txt lowess igr_ploidy_gk_all_seqs_all_exps_hp.txt HCT116