# Simple example summary spreadsheet for tab2mage.pl script.														
# This file illustrates a simple Affymetrix experiment.														
# Lines starting with a '#' are treated as comments and are ignored.														
														
Experiment section														
domain	ebi.ac.uk													
accession	E-EXML-2													
quality_control	biological_replicate													
experiment_design_type	strain_or_line_design;co-expression_design													
name	Transcriptome analysis of invasive verses non-invasive strains of budding yeast 													
description	An experiment was performed to...													
release_date	2004-08-30													
submission_date	2004-07-28													
submitter	John Falstaff													
# The publication details below are fictitious														
publication_title	Comparison of the transcriptomes of invasive verses non-invasive strains of budding yeast 													
authors	John Falstaff													
journal	Nature Genetics													
volume	12													
issue	4													
pages	123-456													
year	2004													
														
# Protocol text may be formatted using standard HTML tags														
Protocol section														
accession	text	name											
P-EXML-1	Cells were grown in YPD (1% yeast extract/2% peptone/2% glucose) to an OD600 of approximately 0.8	Yeast growth											
P-EXML-3	Your protocol text here	Cell lysis and RNA prep											
P-EXML-4	Your protocol text here	cDNA labeling											
														
Hybridization section														
File[raw]	File[normalized]	File[exp]	File[cdf]	Array[accession]	Array[serial]	Protocol[grow]	Protocol[extraction]	Protocol[labeling]	BioSource	BioSourceMaterial	FactorValue[StrainOrLine]	BioMaterialCharacteristics[Organism]	BioMaterialCharacteristics[StrainOrLine]	BioMaterialCharacteristics[Sex]
Data1.CEL	Data1.CHP	Data1.EXP	YG_S98.cdf	A-AFFY-27	243455	P-EXML-1	P-EXML-3	P-EXML-4	S288C 1	whole_organism	S288C	Saccharomyces cerevisiae	S288C	mating_type_a
Data2.CEL	Data2.CHP	Data2.EXP	YG_S98.cdf	A-AFFY-27	244530	P-EXML-1	P-EXML-3	P-EXML-4	Sigma1278b 1	whole_organism	Sigma1278b	Saccharomyces cerevisiae	Sigma1278b	mating_type_a
Data3.CEL	Data3.CHP	Data3.EXP	YG_S98.cdf	A-AFFY-27	348762	P-EXML-1	P-EXML-3	P-EXML-4	S288C 2	whole_organism	S288C	Saccharomyces cerevisiae	S288C	mating_type_a
Data4.CEL	Data4.CHP	Data4.EXP	YG_S98.cdf	A-AFFY-27	234678	P-EXML-1	P-EXML-3	P-EXML-4	Sigma1278b 2	whole_organism	Sigma1278b	Saccharomyces cerevisiae	Sigma1278b	mating_type_a